When I run analysis using ReSharper Command Line Tool I get lots of false errors in the generated xml such as Cannot resolve symbol 'System'. When I analyze the same solution from visual studio I don't get those errors. The solution compiles and runs ok.
Command line tools version: JetBrains Inspect Code 9.0 Update 1
Visual studio resharper version:
JetBrains ReSharper 8.1 Full Edition
Build 126.96.36.1996 on 2013-12-11T23:30:52
I tried clearing cashes but it didn't help.